CYTOGENETICS LAB
 
 Image Cytogenetics Gallery:  Pathology Department University of Washington
Student Instructions
Introduction to Karyotyping
Teacher Notes
References
CTYOGENETIC LAB - KARYOTYPING
 
There are several genetic disorders that involve entire chromosomes.  The objective of this lab will be to:
1)  analyze a set of chromosomes and determine if there is a genetic disorder
2)  investigate the possible effects of the disorder in your karyotype
 3)  explore other types of disorders using the computer and comparison of  karyotypes with other lab groups
 4)  be able to define deletion, inversion, translocation, monosomy, and a trisomy chromosome mutations

PROCEDURE:

  1. Obtain a set of chromosomes
  2. Match the chromosomes with their homologous mate.  One chromosome of each pair is numbered,  as you match your chromosomes number the homologous pairs.  You need to be very systematic.   The number one chromosome is the largest.  Its corresponding mate should be of the same size, with the same banding pattern, and have the same centromere location.
  3. Determine the karyotype abnormality using the Chromosome Analysis Key that is below.  Keep in mind there might be some slight variations.  The key below will help guide you.
  4. Research your abnormality using the resources available.  A photograph of a real karyotype for the disorder is in the computer database.
  5. Locate examples of the five types of chromosome abnormalities  using the computer or karyotypes from other lab groups in the room.
SIMPLE KEY FOR DIAGNOSING CHROMOSOME ABNORMALITIES Introduction to Karyotyping
Karyotyping is the process by which doctors and geneticists take pictures of the chromosomes while the cell are undergoing mitosis. The picture is then enlarged. The picture of the chromosomes are then cut up so that each chromosome is removed. The chromosomes are matched up and attached to a paper according to size. The chromosomes pairs are numbered from largest to smallest. There are 22 pairs of chromosomes which match up exactly. Then the sex chromosomes are paired, in the female (XX) the chromosomes match and in the male (XY) the chromosomes do not match.
  1. Procedure for karyotyping
  2. Different karyotype techniques
  3. Classification of chromosomes using size and centromere placement
  4. Types of Chromosomal mutations
    1. a.) trisomy - an extra chromosome is present. Duplication of a portion of a chromosome may attach to a chromosome or remain as a separate
      fragment.
      b.) monosomy - a chromosome is missing
      c.) translocation is the result of chromosomal breakage but the broken segment transfers itself to a broken segment of another chromosome. There are both balanced and unbalanced translocations.
      d.) deletion - Deletion occurs when a chromosome breaks and a portion of the chromosome is lost.
      e.)  inversion - a section of the chromosome is inverted (reversed) on the same chromosome
The following images are present:
  1. Normal female 46, XX karyotype
  2. Normal male 46, XY karyotype
TRISOMY
  1. Trisomy 13 (47, XX, +13) karyotype
  2. Trisomy 16 with single X chromosome (46, X, +16) karyotype
  3. Trisomy 18 (47, XY, +18) karyotype
  4. Trisomy 21 (47, XY, +21) karyotype
  5. Trisomy XXX, triple XXX (47,XXX) karyotype
  6. Klinefelter's syndrome, trisomy karyotype (47, XXY)
  7. 49,XXXXY,  Variation of Klinefelter's syndrome
  8. Jacobs Syndrome Trisomy XYY
MONOSOMY
  1. Monosomy X, or Turner's syndrome (45, X) karyotype
TRANSLOCATIONS
  1. Robertsonian translocation, 14 to 13, balanced karyotype
  2. Down Syndrome 14-21 Translocation
  3. Philadelphia chromosome (9:22 translocation) karyotype with chronic myelogenous leukemia
DELETIONS
  1. Wolf-Hirschhorn (4p- deletion) syndrome karyotype
  2. Cri-du-chat 46 XX or 46 XY with one chromosome #5 upper arm deletion
  3. Jacobsen's Syndrome (11q Deletion, or 11q-)
  4. DiGeorge Syndrome 22 deletion
INVERSION
  1. Inversion of chromosome 16  
INFORMAL LAB REPORT
    1. Explain what the word cytogenetics means.
    2. Briefly discuss the chromosome abnormality in the karyotype.  Be sure to include the type of abnormality,  the total number of chromosomes in the karyotype,   the specific chromosome involved, the gender of karyotype, and the reason for the gender.
    3. Using your knowledge of meiosis discuss how the chromosome abnormality could have occurred.
    4. After comparing disorders, which of the chromosome disorders seems to be the most damaging? Least?   Explain giving an example.  Why do you think that there was only one monosomy example?
    5. Karyotyping can be used as a prenatal screening tool.  Is a baby guaranteed from genetic disorders if the chromosome configuration appears normal?  Explain.
     

    TEACHER NOTES:
    This lab was developed using the internet as a resource.  Where ever possible available image sources are cited.  The hardcopy karyotypes were generated from a lab manual copy of a basic karyotype by cutting and pasting.   There are usually 12-14 different karyotypes handed out in each class so that students can use their neighbor as a resource not a source.   Included as another link are just the student directions that can be printed for a hardcopy.

    Nancy Hein
    Hawley HS
    Hawley, TX

    nanhei@hawley.esc14.net
     
    References:
    UW Pathology Department Cytogenetics Gallery http://www.pathology.washington.edu/Cyto_gallery/Cyto_gallery_page.html

    Utah Medical Library - Web Path
    http://www-medlib.med.utah.edu/WebPath/webpath.html

    Online Mendelian Inheritance in Man - OMIM
    http://www.hgmp.mrc.ac.uk/omim/searchomim.html

    Cri-Du-Chat Syndrome Support Group
    http://www.cridchat.u-net.com/

    TSS News Group - Turner Syndrome Society
    http://www.onr.com/ts-texas/
    http://laran.waisman.wisc.edu/fv/www/lib_turn.htm

    Pediatric Database (PEDBASE)
    http://www.icondata.com/health/pedbase/index.htm

    Med-line NLM's search service to access the 9 million citations in MEDLINE
    http://www.medpatients.com/medline.htm
     

 modified July 1999